Label Augmented Modality Agnostic Registration (LAMAReg) is a MRI resgistration technique combines deep learning-based segmentation and numerical solutions to generate precise non linear warpfields

End-to-End BIDS app for landmark regression and derivative apps

Snakemake workflow for nnUnet

a wordpress plugin to display interactive transcripts

Automatic localization and identification of salient brain landmarks

Contrast-agnostic segmentation of MRI scans

Common utility functions for working with AFIDs data / workflows

Snakemake + BIDS

Analysis of SCATTR workflow for OHBM 2023

The Starter-kit has moved to the new BIDS website.