Commits

Commits on Dec 12, 2021

New version detection script using git or package build env
Jason Bacon
committed
22296d4
New version detection script using git or package build env
Jason Bacon
committed
503c728

Commits on Dec 8, 2021

Update for biolibc API change
Jason Bacon
committed
a7e0f2c

Commits on Dec 6, 2021

Add program name to --version output
Jason Bacon
committed
bc728a5

Commits on Dec 4, 2021

Bump version
Jason Bacon
committed
1153b43

Commits on Dec 3, 2021

Up max buffered alignments to 131072 based on SRA sample
Jason Bacon
committed
a069d1a
Document recommended alignment filtering
Jason Bacon
committed
c54872c
Reduce max buffered alignments assuming use of samtools -F 0xF0C
Jason Bacon
committed
8944220
Update for sam_buff API change
Jason Bacon
committed
9ac5a00
Add --version flag
Jason Bacon
committed
0773e2b

Commits on Dec 2, 2021

Require at least a field header starting with #CHROM
Jason Bacon
committed
9858fba

Commits on Sep 16, 2021

README.md: Update science port count
Jason Bacon
committed
26aff3c

Commits on Sep 12, 2021

Fix printf placeholders for uint64_t vs size_t

Jason Bacon
authored and
Jason Bacon
committed
7a47c2e

Commits on Sep 11, 2021

Fix CMD_MAX to accommodate max filename size

Jason Bacon
authored and
Jason Bacon
committed
c2166c1

Commits on Aug 14, 2021

Add xtend/string.h for Linux strlcpy()
Jason Bacon
committed
2073297

Commits on Aug 13, 2021

Update for new libxtend API
Jason Bacon
committed
f949826

Commits on Jul 27, 2021

Improve vcf_stats API for eventual factoring
Jason Bacon
committed
07d8cad

Commits on Jul 26, 2021

Clean up vcf stats API
Jason Bacon
committed
9af32c1

Commits on Jul 25, 2021

Better test script interaction
Jason Bacon
committed
cdb7f4f

Commits on Jul 23, 2021

Update for new biolibc accessors/mutators
Jason Bacon
committed
67ef5b6

Commits on Jul 19, 2021

Remove redundant vcf init macro
Jason Bacon
committed
0449a86
Update for biolibc API change
Jason Bacon
committed
3f38dc3

Commits on Jul 18, 2021

Update for biolibc API changes
Jason Bacon
committed
40820ed

Commits on Jul 17, 2021

Add rebuild to test script
Jason Bacon
committed
bc47cd8
Fix skip_upstream_alignments() return value to resolve test failure
Jason Bacon
committed
9d20ee9
Update for biolibc bl_ prefix
Jason Bacon
committed
b823037

Commits on Jul 16, 2021

Update for biolibc API
Jason Bacon
committed
8d52084
Update for biolibc VCF API changes
Jason Bacon
committed
48e1330
Update for biolibc API changes (Add BL_ prefix)
Jason Bacon
committed
10baf41

Commits on Jul 15, 2021

Generate new Makefile.depend
Jason Bacon
committed
267c4e5
Update for changes to biolibc API
Jason Bacon
committed
7a52573

Commits on Jul 14, 2021

Update for SAM function API changes
Jason Bacon
committed
9ceff68
Update for VCF read functions API change
Jason Bacon
committed
dfc0597

Commits on Jul 13, 2021

Update for sam_alignment_init() API change
Jason Bacon
committed
a15e736
Remove ldd

Jason Bacon
authored and
Jason Bacon
committed
9e01cbb