ViraPipe is distributed Apache Spark based metagenome analytics pipeline for scalable detection of pathogens from NGS data

Clinical oncology tumor board decision support system made by the Decider project.

Feature extraction from GEOJson nuclei and tissue segmentation maps

Scalable reference genome assembly from compressed pan-genome index with Spark

PyTorch implementations of Generative Adversarial Networks.

SparkBeagle: scalable distributed genotype imputation in the cloud

This tool is for compressing and indexing pan-genomes and genome sequence collections for scalable sequence and read alignment purposes.

SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as …

ViraPipe is a Apache Spark based scalable pipeline for metagenome analysis from NGS read data

Distributed commonsense AI reasoning framework for IoT applications

A simple implementation that attempts to organize text documents in a manner such that similar documents are located closer together on a tabular grid. The grid grows outwardly, and also vertically…

Bayesian Modeling and Probabilistic Programming in Python