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influenza_a_serotype Public template
Forked from mtisza1/influenza_a_serotypeassign sequencing reads to influenza A serotypes
Python MIT License UpdatedMar 14, 2026 -
docker_image_pusher Public
Forked from tech-shrimp/docker_image_pusher使用Github Action将国外的Docker镜像转存到阿里云私有仓库,供国内服务器使用,免费易用
Apache License 2.0 UpdatedDec 12, 2025 -
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nextclade_dataset_template Public
Forked from nextstrain/nextclade_dataset_templateTemplate repository to generate nextclade datasets
Python UpdatedNov 20, 2023 -
CAT Public
Forked from MGXlab/CAT_packCAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
Python MIT License UpdatedApr 5, 2023 -
AGAT_mode Public
Forked from NBISweden/AGATAnother Gtf/Gff Analysis Toolkit
Perl GNU General Public License v3.0 UpdatedMay 13, 2022 -
ProtHint Public
Forked from gatech-genemark/ProtHintProtein hint generation pipeline for gene finding in eukaryotic genomes
Python Other UpdatedApr 15, 2022 -
elprep Public
Forked from ExaScience/elprepelPrep: a high-performance tool for analyzing sequence alignment/map files in sequencing pipelines.
Go Other UpdatedFeb 9, 2022 -
metaWRAP Public
Forked from bxlab/metaWRAPMetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
Shell MIT License UpdatedFeb 3, 2022 -
VCF-kit-md Public
Forked from AndersenLab/VCF-kitVCF-kit: Assorted utilities for the variant call format
Python MIT License UpdatedMay 5, 2021 -
rnadeseq Public
Forked from qbic-pipelines/rnadeseqDifferential gene expression analysis and pathway analysis of RNAseq data
R MIT License UpdatedOct 26, 2020 -
tag_learn Public
Forked from standage/tagGenome annotation data analysis and management implemented in pure Python
Python BSD 3-Clause "New" or "Revised" License UpdatedOct 21, 2020 -
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cmseq Public
Forked from SegataLab/cmseqSet of utilities on sequences and BAM files
Python UpdatedMar 25, 2020 -
singularity-r Public
Forked from nickjer/singularity-rR in a Singularity container
Roff MIT License UpdatedJan 28, 2020 -
srt-duplicate-line-merger Public
Forked from j1george/srt-duplicate-line-mergermerges duplicate subtitle lines and consolidates timestamps
Python UpdatedOct 7, 2019 -
RNA-seq-downstream-analysis Public
Forked from xuzhougeng/RNA-seq-downstream-analysisArabidopsis RNA_-seq downstream analysis shiny app
R UpdatedJul 22, 2019 -
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ThermoAlign Public
Forked from drmaize/ThermoAlignThermoAlign: software for automated primer design
Python GNU General Public License v3.0 UpdatedApr 14, 2018 -
interproscan-docker Public
Forked from blaxterlab/interproscan-dockerDocker container to run EBI Interproscan
MIT License UpdatedMar 28, 2017