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Showing results

Knowledge graph embedding library bridging encoders from PyG and decoders from TorchKGE

Python 6 Updated Mar 31, 2026
Python 10 11 Updated Nov 6, 2025

Web tool to assess FAIR principles and promote their implementation

Jupyter Notebook 27 8 Updated Mar 13, 2026

A program to extract DICOM metadata and represent it as RDF

Java 3 Updated Dec 7, 2025

MOLGENIS - for scientific data: management, exploration, integration and analysis.

Java 122 96 Updated Mar 4, 2026

Deep dive into WebDataCommons JSON-LD markup Start in local device You need to install Streamlit: pip install streamlit pip install streamlit_option_menu pip install plotly To run the demo use this…

Python 1 Updated Jan 11, 2024

Annotate with anyone, anywhere.

Python 3,133 454 Updated Apr 1, 2026

Beacon v2 Reference Implementation (Data ingestion tools)

Perl 6 8 Updated Aug 8, 2023

Starter kit main repo

9 1 Updated Mar 27, 2026

A data repository to save ML-related metadata crosswalks

5 2 Updated Apr 24, 2025

This repo consists of utility scripts and ecosystem maintenance tools

Jupyter Notebook 4 9 Updated Mar 18, 2026

This work aims to measure the accountability of RDF graphs. To do so, we define accountability requirements as SPARQL queries to be used with the IndeGx framework.

2 Updated Apr 11, 2024

a collection of metrics designed at the Apples to Apples hackathon

HTML 2 7 Updated Apr 6, 2024

A repository hosting Bioschemas validation tools

Jupyter Notebook 2 2 Updated Jun 16, 2024

A package for ontology engineering with deep learning and language models.

Python 288 24 Updated Jan 26, 2026

BERTMap: A BERT-Based Ontology Alignment System

Python 70 7 Updated Apr 15, 2024

Python client for searching, publishing and modifying nanopublications.

Python 32 12 Updated Mar 30, 2026

Mondo Disease Ontology

Jupyter Notebook 297 65 Updated Apr 1, 2026
Python 4 Updated Jul 24, 2023

This repository is now archived. Further development has been moved to https://github.com/medkit-lib/medkit.

Python 24 1 Updated Nov 21, 2023

An up-to-date and explanatory Python project skeleton with continuous integration services.

Python 89 18 Updated Apr 4, 2024

RDF schema of phenopackets

8 5 Updated Oct 10, 2024

Python library for parsing FAIR Signposting links

Python 7 5 Updated Aug 29, 2024

Details of the harvesting of Bioschemas markup from live deployments on the Web.

Jupyter Notebook 3 4 Updated Dec 20, 2022
Jupyter Notebook 2 Updated Jan 15, 2026

ECCB2021 tutorial: Inside the ‘Black Box’: Explainable Deep Learning Models For Image and Sequence Classification

Jupyter Notebook 10 6 Updated Sep 3, 2021

Biosignal Processing in Python

Python 642 284 Updated Aug 2, 2022

Machine Learning on ECG to predict heart-beat classification.

Jupyter Notebook 36 18 Updated Mar 18, 2019

ECG classification using MIT-BIH data, a deep CNN learning implementation of Cardiologist-level arrhythmia detection and classification in ambulatory electrocardiograms using a deep neural network,…

Python 258 67 Updated Feb 18, 2026
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