Official code repository for GATK versions 4 and up

Java utilities for Bioinformatics

A Tool to Annotate and Prioritize Exome Variants

Simple test framework for Nextflow pipelines

sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java

LIkelihood Ratio Interpretation of Clinical AbnormaLities

Computational analysis for mass spectrometry-based proteomics data

Biojava and ADAM integration.