Stars
Backend code for the MERFISH+ line of spatial transcriptomic microscopes
This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.
MERlin is an extensible analysis pipeline applied to decoding MERFISH data
Implementations of edge (ED, EDColor, EDPF), line (EDLines), circle and low eccentric ellipse (EDCircles) detection algorithms.
A GPU-based LZSS compression algorithm, highly tuned for NVIDIA GPGPUs and for streaming data, leveraging the respective strengths of CPUs and GPUs together.
Fast clustering Expectation Maximization algorithm for Gaussian Mixture Models.
ruptures: change point detection in Python
A simple macOS application that will prevent iTunes or Apple Music from launching.
This tool allows you to type a post, link to content, and strategically select the image you want to display with the post.
A new non-supervised gene prediction algorithm for bacterial and archaeal genomes
nanoflann: a C++11 header-only library for Nearest Neighbor (NN) search with KD-trees
Feature selector is a tool for dimensionality reduction of machine learning datasets
A python package to quickly find repeats in a DNA sequence
A program to find the path through a network of nodes.
ReadMapper is a program that maps sequencing reads to a nucleotide backbone, and then creates a publication quality figure.
An implementation of a fixed point integer datatype for the C programming language.
A perl implementation of the Smith-Waterman amino acid alignment algorithm
A python implementation of the kmeans algorithm that functions as a drop in for sklearn