Stars
A repository containing all code for the HNSCC paper.
Python tool for converting files and office documents to Markdown.
Teams-first Multi-agent orchestration for Claude Code
The agent harness performance optimization system. Skills, instincts, memory, security, and research-first development for Claude Code, Codex, Opencode, Cursor and beyond.
This guide is designed for OpenClaw itself (Agent-facing), not as a traditional human-only hardening checklist.
upload big files to Zenodo using cURL, jq and bash
CRAGR_v2 is a CRAGR pipeline that handles hotspots calling for multiple replicates using the irreproducible discovery rate (IDR).
FinaleToolkit is a package and standalone program to extract fragmentation features of cell-free DNA from paired-end sequencing data.
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates
De novo characterization of cell-free DNA fragmentation hotspots
Foreign Contamination Screening caller scripts and documentation
An easy-to-use, flexible website template for labs. https://doi.org/10.5281/zenodo.17228741
Fast and native toolsuite for BED file manipulation
A list of deep learning implementations in biology
A collection of tools for Hi-C data analysis
Fast, integrative fine mapping with functional data
Python初学者（零基础学习Python、Python入门）书籍、视频、资料、社区推荐
A curated list of awesome deep learning applications in the field of computational biology
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)