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  • Wellcome Trust Sanger Institute
  • Cambridge

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@wtsi-npg

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Showing results

Assortment of useful scripts

Shell 1 Updated Mar 19, 2012
1 Updated Mar 22, 2012

Reference-based compression of SRA data

Java 1 1 Updated Mar 13, 2012

Tests for samtools (including iRODS-specific tests)

1 Updated Mar 15, 2012

patch files for various releases of samtools

2 Updated Mar 22, 2012
C 4 1 Updated Sep 14, 2016

Tools (written in C using htslib) for manipulating next-generation sequencing data

C 1,865 610 Updated Mar 18, 2026

Scripts I use on Git repositories

Perl 3 2 Updated Jun 4, 2023

Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

Java 299 223 Updated Aug 22, 2018

Reference-based compression of SRA data

Java 37 5 Updated Mar 26, 2013