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Fast DNA search and [host] depletion using minimizers

Rust 107 16 Updated Mar 13, 2026

📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

R 450 26 Updated Dec 28, 2025

Tandem signatures of DNA damage and misrepair in cancer

Python 5 Updated Sep 12, 2025

MetagenOmic read Re-Assigner and abundance quantifier

Rust 20 Updated Jan 31, 2025

Fit LOg-RAtio Lasso regression for compositional covariates

R 15 1 Updated Feb 8, 2026

A 'ggplot2' extension that focusses on expanding the plotter's arsenal of guides, such as axes, legends and colour bars. It brings various improvements to existing guides by re-implementation, as w…

R 276 9 Updated Oct 7, 2025

ggplot extension: options for tailored facets, multiple colourscales and miscellaneous

R 675 41 Updated Oct 2, 2025

A nextflow pipeline for decontamination of short reads, long reads and contigs

Nextflow 54 5 Updated Jun 30, 2025

Integrative Composable Visualization Framework for ggplot2

R 392 18 Updated Jan 15, 2026

A Julia package for extracting mutation signatures using topic models

Julia 19 4 Updated Feb 23, 2022

A Python toolkit/library for reality-centric machine/deep learning and data mining on partially-observed time series, including SOTA neural network models for scientific analysis tasks of imputatio…

Python 1,981 183 Updated Mar 27, 2026

Gerbil Scheme

Scheme 1,245 119 Updated Apr 3, 2026

A dynamic language and bytecode vm

C 4,208 257 Updated Apr 3, 2026

A modernized, complete, self-contained TeX/LaTeX engine, powered by XeTeX and TeXLive.

C 4,670 194 Updated Oct 6, 2025

A set of keybindings for evil-mode

Emacs Lisp 1,321 277 Updated Mar 30, 2026
Jupyter Notebook 2 1 Updated Jan 12, 2023

D2 is a modern diagram scripting language that turns text to diagrams.

Go 23,359 620 Updated Oct 14, 2025

A clean interface for org files (Emacs)

Emacs Lisp 301 7 Updated Jan 9, 2024

Various dockerfiles for our bioinformatics pipelines

Dockerfile 4 Updated Mar 25, 2026

Emacs side frames

Emacs Lisp 95 2 Updated Sep 3, 2022

An Emacs minor mode for literate & annotated bibliography

Emacs Lisp 141 7 Updated Aug 22, 2022

Rudimentary Roam replica with Org-mode

Emacs Lisp 5,931 492 Updated Feb 24, 2026

Single Cell Genomes with Allele Specificity

R 12 1 Updated Feb 13, 2026

💫 vertico.el - VERTical Interactive COmpletion

Emacs Lisp 1,807 71 Updated Mar 30, 2026
Python 16 5 Updated May 22, 2023

Use a proportional typeface globally while keeping a monospaced typeface for code in Emacs

Emacs Lisp 50 Updated Jan 7, 2022

A polished Dired with batteries included.

Emacs Lisp 1,067 55 Updated May 4, 2025

Yet another modal editing on Emacs / 猫态编辑

Emacs Lisp 1,572 156 Updated Sep 14, 2025

GNU Emacs / N Λ N O - Emacs made simple

Emacs Lisp 2,864 198 Updated Oct 14, 2025
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