-
susie_small_sample Public
Forked from william-denault/susie_small_samplean attempt to mitigate susie coverage in small sample size
Jupyter Notebook MIT License UpdatedSep 25, 2025 -
mmcloud Public
Forked from StatFunGen/mmcloudUtilities to manage jobs on MMCloud from MemVerge Inc
Shell MIT License UpdatedSep 7, 2025 -
vl_apoe_mapping Public
Virtual Lab for mapping extra genetic effects in APOE region independent of E2/E3/E4
Python UpdatedAug 11, 2025 -
-
statgen-courses Public
Forked from statgenetics/statgen-coursesTutorials for statistical genetics short courses
Dockerfile UpdatedJun 22, 2025 -
-
deepdish Public
Forked from uchicago-cs/deepdishFlexible HDF5 saving/loading and other data science tools from the University of Chicago
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 20, 2025 -
R01-AD-2022-codes Public
Source codes to reproduce prelim results for my R01 on Alzheimer's disease study in 2022
Jupyter Notebook UpdatedOct 31, 2024 -
cnv-gene-mapping Public
Develop methods that leverage copy number variations (CNVs) for gene mapping
-
recipe_staging Public
Forked from danielnachun/recipe_stagingStaging repository to build and upload conda packages before their submission to conda-forge and bioconda
C++ UpdatedJun 14, 2024 -
susieR Public
Forked from stephenslab/susieRR package for "sum of single effects" regression.
-
jupyterlab-sos-feedstock Public
Forked from conda-forge/jupyterlab-sos-feedstockA conda-smithy repository for jupyterlab-sos.
BSD 3-Clause "New" or "Revised" License UpdatedApr 11, 2024 -
DENTIST Public
Forked from Yves-CHEN/DENTISTDENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.
-
mvarbvs Public
Multivariate Bayesian variable selection via variational inference
-
neuro-twas Public
Development code (private repo) for TWAS related multiomic gene-mapping in Alzheimer's disease data
-
xqtl-pipeline Public
Forked from StatFunGen/xqtl-protocolMolecular QTL data analysis pipeline developed for ADSP functional genomic xQTL consortium
Jupyter Notebook MIT License UpdatedDec 22, 2023 -
-
rotation-2023 Public
Rotation projects for first year MS research assistants
-
sos Public
Forked from vatlab/sosSoS workflow system for daily data analysis
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 21, 2023 -
dotfiles Public
Forked from danielnachun/dotfilesForked from Daniel Nachun's dotfile repo
Shell UpdatedAug 12, 2023 -
-
flashier Public
Forked from willwerscheid/flashierA faster and angrier package for EBMF. In progress.
R Other UpdatedMay 18, 2023 -
-
SEQLinkage Public
Collapsed Haplotype Pattern Method for Linkage Analysis of Next-Generation Sequencing Data
-
-
gtex-pipeline Public
Forked from broadinstitute/gtex-pipelineGTEx & TOPMed data production and analysis pipelines
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 21, 2022 -
statistical-genetics-resources Public
Forked from sinarueeger/statistical-genetics-resourcesResources (software, data, research article) in the field of statistical genetics
UpdatedNov 10, 2021 -
beamer Public
Forked from cympfh/beamermarkdown->beamer templates for pandoc
TeX UpdatedSep 27, 2021 -
plink2R Public
Forked from gabraham/plink2RRead PLINK BED/BIM/FAM files into R
C++ UpdatedJul 26, 2021 -
bioworkflows Public
Forked from JiayiHelenZhou/bioworkflowsIn-house computational biology workflows at Columbia Neurology
Jupyter Notebook UpdatedMar 26, 2021
{{ message }}