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Showing results
Jupyter Notebook 4 Updated Sep 8, 2025

A standalone end-to-end data analysis pipeline for Duplex Sequencing

HTML 21 10 Updated Oct 25, 2023

A lightweight, modern and flexible, log4j and futile.logger inspired logging utility for R

HTML 320 48 Updated Jan 6, 2026

A collection of plots for long read sequencing FastQ files from devices like Oxford Nanopore's MinION and PromethION.

Python 12 Updated Feb 14, 2023

Serverless R message queue using SQLite

R 57 9 Updated Nov 9, 2024

SeqAn's official repository.

C++ 501 172 Updated Mar 18, 2026

Real time data analysis tools for the minION sequencing platform.

PHP 30 13 Updated Apr 12, 2022

GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html Note: This was the original repository which…

C++ 182 43 Updated Jul 30, 2019

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

C 1,730 577 Updated Mar 22, 2025
NSIS 8 1 Updated Aug 6, 2025

caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models

R 1,675 630 Updated Dec 10, 2024

R's data.table package extends data.frame:

R 3,871 1,045 Updated Apr 17, 2026

Google Spreadsheets R API

R 785 187 Updated Feb 4, 2022

a toolkit for working with Oxford nanopore data

Jupyter Notebook 242 86 Updated Feb 6, 2023

Resumes generated using the GitHub informations

JavaScript 62,821 1,367 Updated Feb 15, 2023

Generate reproducible html5 slides from R markdown

R 842 335 Updated Aug 2, 2016

A general-purpose tool for dynamic report generation in R

R 2,448 879 Updated Apr 9, 2026

RStudio is an integrated development environment (IDE) for R

Java 4,983 1,167 Updated Apr 18, 2026

Tools to make an R developer's life easier

R 2,505 762 Updated Apr 16, 2026