Repo for the Cambridge Centre for Proteomics, University of Cambridge, "Expression Proteomics Course"

A community collection of bioinformatic analyses for anyone to learn and adapt

CellRank: dynamics from multi-view single-cell data

Single cell RNA-seq analysis bundle

R implementation of GeneTrajectory

Collection of Python and other data analysis resources

scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction

reticulate-free single cell format conversion

Positron, a next-generation data science IDE

This is the alpha version of the CellOracle package

Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are significantly different to one another in terms of their gene expr…

Code chunks for generating different figures in R.