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1. ARCkmerFinder ARCkmerFinder Public

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2. fastCN-smk fastCN-smk Public

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3. WGAC WGAC Public

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4. RepeatMaskingChaisson RepeatMaskingChaisson Public

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5. RepeatMaskingChaisson_single RepeatMaskingChaisson_single Public

   Forked from hsiehphLab/RepeatMaskingChaisson

   a fork of RepeatMaskingChaisson without trf and masks using a single library

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6. methylation_runs_winnowmap methylation_runs_winnowmap Public

   After running Dorado on ONT reads to basecall with methylation, this aligns those basecalled reads against an assembly

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