Dynamic, concurrent, and cache-efficient hash table for streaming k-mer operations

Library for writing Reduced Alignment Data (RAD) format files.

Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays

Playing around with and getting to know CMake.

Collate collections of key-value pairs, deposited from multiple producers; and iterate over the collated collection.

Fastest FastX Parser in the West

An attempt on designing an arbitrary length k-mer class; and to generate the codes of the classes for all k-values at compile-time using template metaprogramming.

Playing around with C++ custom containers and iterators designing.

An implementation of the ray tracing technique to render images of basic geometric shapes with simple simulation of various concepts (reflection, refraction, scattering etc.) from Physics.

A simple classifier for recognizing handwritten characters from image data, implementing the naive Bayes and the k-nearest neighbor classifications.

A lossless data compressor using the Huffman Coding.

A Voronoi diagram generator for any given set of points in the Euclidean plane using an incremental computation of the corresponding Delaunay triangulation.

Formal Verification of the Correctness of a Bubble Sort Implementation Using Coq

Implementation of a basic Bloom filter and of a blocked Bloom filter.

Implementation of: an efficient basic bitvector library with constant-time set and get words; a succint, constant-time bit-vector rank-support data structure; a succint, logarithmic-time bit-vector…

Peer-graded Assignment: Bash, Make, Git, and GitHub

A project submitted as the requirement of the course CSE 549 (Computational Biology), titled as "Efficient Parallelization for KmerEstimate: A Streaming Algorithm for Estimating k-mer Counts with O…