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2 stars written in Java
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A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

Java 1,061 382 Updated Mar 24, 2026

Compliance test suite for the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

Java 10 23 Updated Jan 24, 2018