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eager Public
Forked from nf-core/eagerA fully reproducible and state-of-the-art ancient DNA analysis pipeline
Nextflow MIT License UpdatedJan 30, 2026 -
community-archive Public
Forked from poseidon-framework/community-archiveThe Poseidon Community Archive (PCA)
UpdatedJan 16, 2026 -
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nf-core-test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedMar 25, 2025 -
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comp_human_adna_book Public
Forked from MPI-EVA-Archaeogenetics/comp_human_adna_bookThis book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis, with a particular emphasis on population genetics.
Mathematica UpdatedSep 12, 2024 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedJun 14, 2024 -
run_admixtools Public
Nextflow pipeline (DSL2) that runs fstatistics with AdmixTools, taking different input types (VCF, PLINK, EIGENSTRAT).
Nextflow MIT License UpdatedFeb 27, 2024 -
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Selection-Signals-Tools Public
Repository with pipelines for running selection statistics and fully annotate signals.
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedFeb 10, 2023 -
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minicurso_junio_2021 Public
Forked from ComunidadBioInfo/minicurso_junio_2021HTML UpdatedJun 10, 2021 -
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nf-ancestral-variation Public
A pipeline to get the ancestral annotations variants.
Nextflow UpdatedNov 11, 2020 -
nf-vcf2treemix Public
Pipeline that takes a pop vcf, runs and plot TreeMix
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nf-aims-frequencies Public
Pipeline to annotate frequencies of SNPs in gnomAD v3
Nextflow UpdatedJan 25, 2020 -
nf-format-dbSNP-gnomAD Public
Pipeline to prepare dbSNP VCF and tsv coverage grom gnomAD for analysis.
Nextflow UpdatedJan 21, 2020 -
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nf-mre-postions-counts Public
Code for counting and giving positions of MRE snps.
Nextflow UpdatedNov 23, 2019 -
nf-ancestral-vcf-prep Public
Pipeline to filter and merge ancestral vcfs from different samples.
Nextflow UpdatedOct 19, 2019 -
nf-join-beds Public
A pipeline to join and tag beds from different files.
Nextflow UpdatedOct 11, 2019 -
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ExtendAlign Public
Forked from Flores-JassoLab/ExtendAlignA computational algorithm for delivering multiple global alignment results originated from local alignments.
Makefile UpdatedMay 1, 2019
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