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25 stars written in Java
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Free universal database tool and SQL client

Java 49,308 4,086 Updated Mar 27, 2026

OpenAPI Generator allows generation of API client libraries (SDK generation), server stubs, documentation and configuration automatically given an OpenAPI Spec (v2, v3)

Java 26,036 7,459 Updated Mar 27, 2026

RStudio is an integrated development environment (IDE) for R

Java 4,976 1,166 Updated Mar 27, 2026

A machine learning software for extracting information from scholarly documents

Java 4,742 537 Updated Mar 27, 2026

Get information about countries via a RESTful API

Java 2,269 356 Updated Nov 27, 2023

cBioPortal for Cancer Genomics

Java 983 847 Updated Mar 27, 2026

AR Copy Paste - Text Proto

Java 722 184 Updated Dec 12, 2022

A quality control analysis tool for high throughput sequencing data

Java 589 113 Updated Mar 20, 2026

PDF Toolkit. 📎 🔨 🔧 ✂️ 📑 📁📎 🔖 🚧 👷

Java 268 26 Updated Aug 26, 2025

SwellRT main project. Server, JavaScript and Java clients

Java 240 32 Updated Nov 12, 2021

Text Only Genome Viewer!

Java 234 17 Updated Mar 25, 2026

Bio4j abstract model and general entry point to the project

Java 122 19 Updated Dec 16, 2016

A non-official GitHub mobile app

Java 79 162 Updated Sep 21, 2017

Dieci anni di esercizi di programmazione

Java 54 14 Updated Jan 15, 2021

The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.

Java 35 12 Updated Oct 7, 2024

Research prototype with tutorial. Start here to learn about and try YesWorkflow.

Java 33 13 Updated Feb 23, 2019

TileDB Connector for TrinoDB

Java 29 2 Updated Mar 7, 2024

Java JNI interface to the TileDB Arrays storage and query engine

Java 25 5 Updated Jan 24, 2026
Java 14 6 Updated Jul 18, 2021

TileDB Connector for PrestoDB

Java 8 1 Updated Mar 7, 2024

Collaborative editing of Google Docs with R scripting

Java 4 Updated Mar 17, 2026

JDBC driver for TileDB-Coud

Java 4 1 Updated Jun 10, 2025

PINT is a new comprehensive web-based system to store, visualize, and query experimental proteomics data obtained under different experimental conditions and projects. PINT provides a very powerful…

Java 4 Updated Aug 6, 2024

GBC (short for GenoType Blocking Compressor) is a blocking compressor for genotype data, which aims at creating a unified and flexible structure-GenoType Block (GTB) for genotype data in the varian…

Java 2 2 Updated Feb 8, 2023

A vocabulary drill tool

Java 1 Updated May 1, 2021