Linear mixed models on ARGs

TELOmere SEARCH in Long sequencing Reads

Effortless Pixi Project Management Integration in VSCode

BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

Developmental Nextflow DSL2 components

Evaluation and polishing workflows for T2T genome assemblies

A refreshingly simple data-driven game engine built in Rust

Typst template for generating invoices

GBZ file format for pangenome graphs

Agnesoft Graph Database

dev tools, env vars, task runner

An embedded key-value database in pure Rust

CLI tool for flexible and fast adaptive sampling on ONT sequencers

Python wrapping multithreaded bindings to minimap2

A pairwise sequence aligner written in Rust

A bevy 3D text mesh generator for displaying text

GERP++ code from Sidow Lab modified by Kevin Thornton to compile properly.

Real-time microphone noise suppression on Linux.

Parse LDtk JSON files into typed Rust objects.

A lightweight clojure wrapper for the Robinhood Web API.

Bioinformatics I/O libraries in Rust

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences

ODG: Omics Database Generator - Integration toolkit for -omics data

Yet Another Chimeric Read Detector

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

The user-friendly command line shell.

Rust bindings for the Python interpreter

Mirage generates multiple sequence alignments of proteoforms by mapping sequences back to their coding regions on the genome and then compressing those mappings into alignments.

A Clojure to Rust transpiler