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Interactive and integrated analysis of multiplexed tissue microarrays

Python 15 3 Updated Jun 15, 2026

Python tool for semi-automatic extracting cores from tissue microarrays

Python 4 Updated Aug 8, 2025
Jupyter Notebook 19 3 Updated Sep 19, 2025

This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication

Jupyter Notebook 17 2 Updated Jan 2, 2023

A Collection of Platform, Tools, and Resources for Antibody Engineering

Python 1 Updated Jun 30, 2023

A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces

Python 218 55 Updated Mar 30, 2026

Tool for rapid clustering of antibody models by the structure of their CDRs.

Python 26 8 Updated Jul 14, 2025

Book: Analysis of Pure Finance

1 Updated Jul 15, 2024

interactive brokers ibkr api command line interface cli giving you the fastest way to lose all your money

Python 215 36 Updated Oct 4, 2025

low latency, high throughput load balancer for real time stock market trade feed (using polygon.io websocket API)

C 59 12 Updated Feb 19, 2023

Python sync/async framework for Interactive Brokers API (replaces ib_insync)

Python 1,633 234 Updated May 18, 2026
Python 12 4 Updated Dec 19, 2022

Generative Language Modeling for Antibody Design

Python 190 32 Updated Oct 5, 2024

Antibody Numbering and Antigen Receptor ClassIfication

Python 276 124 Updated May 21, 2024

BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody se…

Python 247 64 Updated May 13, 2025

The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody sequences and structures

Jupyter Notebook 13 8 Updated Sep 21, 2023

The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody sequences and structures

Jupyter Notebook 31 6 Updated Jul 8, 2024

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

Python 421 71 Updated Sep 3, 2023

Predict the structure of immune receptor proteins

Jupyter Notebook 182 43 Updated Nov 11, 2025

An introduction to deepcell and deep learning

Jupyter Notebook 155 26 Updated Oct 21, 2024

An R Package for general purpose TIFF file I/O which plays nice with ImageJ

R 17 9 Updated Jan 26, 2026

Pure Python from-scratch zero-dependency implementation of Bitcoin for educational purposes

Jupyter Notebook 1,911 327 Updated Jun 21, 2021

A python wrapper for Alpha Vantage API for financial data.

Python 4,841 777 Updated Jun 7, 2026

A curated list of awesome Deep Learning tutorials, projects and communities.

28,461 6,355 Updated May 26, 2025

Zero to Deep Learning Bootcamp

Jupyter Notebook 39 65 Updated Apr 25, 2020

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

R 495 226 Updated Feb 25, 2026

Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.

HTML 35 22 Updated Aug 25, 2023
R 7 Updated Apr 17, 2015

EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding of correlations between various genome features.

JavaScript 71 12 Updated Mar 1, 2023
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