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Starred repositories

13 stars written in MATLAB
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Evolutionary multi-objective optimization platform

MATLAB 1,981 508 Updated Jul 19, 2025

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

MATLAB 269 333 Updated Nov 7, 2025

The generic genome-scale metabolic model of Homo sapiens

MATLAB 122 55 Updated Sep 11, 2025

The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.

MATLAB 117 56 Updated Oct 24, 2025

The consensus GEM for Saccharomyces cerevisiae

MATLAB 113 52 Updated Oct 8, 2025

Simple Matlab package management inspired by pip

MATLAB 86 22 Updated Nov 22, 2024

Toolbox for including enzyme constraints on a genome-scale model.

MATLAB 78 52 Updated Oct 23, 2025

Differential Evolution for Multiobjective Optimization and its variants

MATLAB 32 17 Updated Mar 30, 2016

A 3-Dimensional View of Human Metabolism and Disease

MATLAB 31 9 Updated Feb 28, 2018

Bayesian metabolic flux analysis

MATLAB 10 Updated Aug 29, 2018

RefBool - a reference-based algorithm for booleanizing gene expression data

MATLAB 7 2 Updated Nov 13, 2017

Diversity-based enumeration of optimal context-specific metabolic networks

MATLAB 7 1 Updated Jul 2, 2021

unsteady-state Flux Balance Analysis (uFBA)

MATLAB 1 Updated Jun 23, 2017