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Showing results

The Go programming language

Go 130,715 18,438 Updated Nov 6, 2025

Keeping track of bioinformatics related training

2 Updated Aug 27, 2025

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

Go 445 32 Updated May 6, 2025

LexicMap: efficient sequence alignment against millions of prokaryotic genomes

Go 196 8 Updated Oct 17, 2025

Queue-agnostic background job library for Go, with a pleasant API and powerful features.

Go 324 5 Updated Sep 23, 2025

Wavefront alignment algorithm (WFA) in Golang

Go 32 Updated Jul 26, 2025

An elegant CSS Framework.

SCSS 299 29 Updated Oct 27, 2023

Run a command when files change

Go 3,519 141 Updated Nov 9, 2023

Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

Python 387 59 Updated Nov 3, 2025
Python 4,469 476 Updated Jul 25, 2024

The Python micro framework for building web applications.

Python 70,717 16,611 Updated Oct 14, 2025

nucleic acid folding

Python 106 17 Updated Aug 12, 2025

Interact with your documents using the power of GPT, 100% privately, no data leaks

Python 56,774 7,598 Updated Nov 13, 2024

Deep Learning Study Group

Jupyter Notebook 330 106 Updated Jan 11, 2021

Making bioinformatics fun again

Python 74 15 Updated Oct 15, 2025
C 32 2 Updated Dec 16, 2022

finding conserved regions in highly diverse genomes

Go 15 4 Updated Jun 1, 2025

bit-packed k-mers methods for Golang

Go 9 Updated Nov 14, 2023

safe and easy casting from one type to another in Go

Go 3,875 320 Updated Oct 31, 2025

GTDB taxonomy taxdump files with trackable TaxIds

R 55 2 Updated Apr 29, 2025

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Go 1,478 173 Updated Oct 30, 2025

genome sized sequences clustering

C++ 17 3 Updated Dec 29, 2020

Accurate metagenomic profiling && Fast large-scale sequence/genome searching

Go 200 15 Updated Sep 22, 2023

A k-mer serialization package for Golang

Go 7 Updated Jun 15, 2022

A library for writing system daemons in golang.

Go 2,288 251 Updated Jul 23, 2024

HGVS variant name parsing and generation

Python 175 78 Updated Jun 14, 2023

Bayesian haplotype-based mutation calling

C++ 319 36 Updated Oct 1, 2025

This Snakemake pipeline implements the GATK best-practices workflow

Python 260 147 Updated Jun 8, 2023

Cross platform GUI toolkit in Go inspired by Material Design

Go 27,417 1,491 Updated Nov 5, 2025

Task automation Go library

Go 636 33 Updated Nov 3, 2025
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