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A Python-based command-line application for detecting pollen grains from image stacks.

Python 2 Updated Mar 27, 2026
Jupyter Notebook 1 1 Updated Jul 23, 2023

Repository to map the change of the gazetteers of Scotland (1803 to 1901)

Jupyter Notebook 1 1 Updated Dec 5, 2025

Mix-Domain Contrastive Learning for Unpaired H\&E-to-IHC Stain Translation (ICIP 2024)

Python 8 2 Updated Aug 23, 2024

DeeperHistReg - Source Code

Jupyter Notebook 1 Updated Aug 27, 2025

The repository provides code for running inference with the Meta Segment Anything Model 2 (SAM 2), links for downloading the trained model checkpoints, and example notebooks that show how to use th…

Jupyter Notebook 1 Updated Aug 29, 2025
Python 1 Updated Jun 24, 2024
Python 223 10 Updated Jun 24, 2024

A Python-based command-line application for basic post-processing of pollen detection images using Segment Anything Model 2 (SAM 2).

Python 1 Updated Jun 18, 2025

Python package for reading DICOM WSI file sets.

Python 48 9 Updated Mar 2, 2026

a Mirador plugin that adds image manipulation tools to the user interface

JavaScript 12 15 Updated Oct 13, 2025

a Mirador 3 plugin that adds annotation creation tools to the user interface

JavaScript 43 43 Updated Feb 12, 2026

Elevator is a multi-instance digital asset repository.

JavaScript 12 2 Updated Mar 27, 2026

Collection of tools developed and maintained by Pfaff Lab

Python 5 22 Updated Mar 18, 2026

A Python-based command-line application for converting Hamamatsu NanoZoomer Digital Pathology Image (NDPI) format images into cropped tile images.

Python 1 2 Updated Oct 25, 2025

👀 Segment Anything 2 + Docker 🐳

Dockerfile 69 12 Updated Oct 29, 2024

The repository provides code for running inference with the Meta Segment Anything Model 2 (SAM 2), links for downloading the trained model checkpoints, and example notebooks that show how to use th…

Jupyter Notebook 18,795 2,401 Updated Mar 20, 2026

Generates a shell script that allows one to download the extracted features files for a given set of volume ids.

Scala 2 Updated Mar 22, 2022

Extracts features (token counts, POS tags, etc.) from a list of HT volumes, to aid in non-consumptive research.

Scala 2 Updated Mar 26, 2025

Clowder v2 (in development)

TypeScript 15 6 Updated Mar 18, 2026

Source code repository of "Safer Illinois" App - the official COVID-19 app of the University of Illinois.

Dart 33 23 Updated Apr 27, 2022

Source code repository of "Illinois" App - the official mobile app of the University of Illinois.

Dart 51 25 Updated Feb 27, 2026

Torchlite web interface

TypeScript 1 Updated Mar 26, 2026

Backend API service for Torchlite web dashboard

Python 2 Updated Mar 27, 2026

Implementation of a quantum simulator using APL

APL 19 4 Updated May 2, 2025

[DEPRECATED prototype] Multimodal Access and Interactive Data Representation

HTML 28 5 Updated May 1, 2025

Pytorch implementation of FlowNet 2.0: Evolution of Optical Flow Estimation with Deep Networks

Python 3,277 748 Updated May 28, 2023

Bring your code to the conversations you care about with GitHub's integration for Slack

3,446 526 Updated Jun 19, 2025

Model API for GALACTICA

Jupyter Notebook 2,740 266 Updated Mar 5, 2023
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