PhD Candidate BioENG, UC San Diego
Research: Genomics | Pangenomics | ML
Interested in discovering & applying the underlying math that describes biology
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Systems Biology Research Group
- California
- @BioByteBard
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nbmf_mm Public
NBMF-MM: Bernoulli Mean-Parameterized Non-negative Binary Matrix Factorization with Majorization-Minimization
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gffpandas Public
Forked from foerstner-lab/gffpandasParse GFF3 into Pandas dataframes
Python ISC License UpdatedJan 20, 2022 -
panaroo Public
Forked from gtonkinhill/panarooAn updated pipeline for pangenome investigation
Python MIT License UpdatedDec 21, 2021 -
amr_pangenome Public
Forked from jhyun95/amr_pangenomePan-genome construction/analysis tools centered around PATRIC and antimicrobial resistance
Python UpdatedOct 21, 2021 -
memote Public
Forked from opencobra/memotememote – the genome-scale metabolic model test suite
HTML Apache License 2.0 UpdatedOct 8, 2018 -
cookiecutter-memote Public
Forked from opencobra/cookiecutter-memoteA cookiecuttter template for memote model repositories
Shell MIT License UpdatedMay 30, 2018 -
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datasharing Public
Forked from jtleek/datasharingThe Leek group guide to data sharing
UpdatedJan 19, 2016 -
Number2 Public
Need the loo? Look with Number2! It's the Yelp for Bathrooms
GNU General Public License v2.0 UpdatedApr 5, 2015