A minimal PyTorch re-implementation of AlphaFold2's model & training

Agent skills for Obsidian. Teach your agent to use Markdown, Bases, JSON Canvas, and use the CLI.

Evolution Pretraining Fully in Int Formats

Open-source implementation of AlphaEvolve

Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders

⚡️ A curated list of awesome performance stories

All code necessary for reconstructing Bonsai-trees on high-dimensional data and visualizing them in Bonsai-scout

Fully Local Manus AI. No APIs, No $200 monthly bills. Enjoy an autonomous agent that thinks, browses the web, and code for the sole cost of electricity. 🔔 Official updates only via twitter @Martin9…

Prefect is a workflow orchestration framework for building resilient data pipelines in Python.

Minimal reproduction of DeepSeek R1-Zero

AI-powered ab initio biomolecular dynamics simulation

Track your Data Science. Skore's open-source Python library accelerates ML model development with automated evaluation reports, smart methodological guidance, and comprehensive cross-validation ana…

A fun party trick to run Python code from another venv into this one.

Obsidian Web Clipper templates for various sites.

🛠 Python project template generator with batteries included

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

Fast State-of-the-Art Static Embeddings

BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody se…

An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.

Protein function prediction using a variational autoencoder

A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.

5ire is a cross-platform desktop AI assistant, MCP client. It compatible with major service providers, supports local knowledge base and tools via model context protocol servers .

A course on aligning smol models.

Sync notes between local and cloud with smart conflict: S3 (Amazon S3/Cloudflare R2/Backblaze B2/...), Dropbox, webdav (NextCloud/InfiniCLOUD/Synology/...), OneDrive, Google Drive (GDrive), Box, pC…

🌱 a fast, batteries-included static-site generator that transforms Markdown content into fully functional websites

An extremely fast Python package and project manager, written in Rust.

Improved Inference of Ortholog Groups using Hidden Markov Models