#

bigwig

Here are 30 public repositories matching this topic...

deeptools / pyBigWig

A python extension for quick access to bigWig and bigBed files

bigwig bigbed bioinfomatics

Updated Jan 17, 2025
C

jackh726 / bigtools

A high-performance BigWig and BigBed library in Rust

rust bigwig bigbed

Updated Oct 21, 2025
Rust

chrovis / cljam

A DNA Sequence Alignment/Map (SAM) library for Clojure

clojure bioinformatics genomics sam vcf fasta bigwig bed bam fastq bcf cram wig gff 2bit

Updated Aug 25, 2025
Clojure

junjunlab / transPlotR

An elegant package to visualize gene structures

visualization gene r transcript bigwig bed linkvis

Updated Apr 8, 2023
R

dpryan79 / libBigWig

A C library for handling bigWig files

bioinformatics bigwig bigbed

Updated Jan 17, 2025
C

dputhier / pygtftk

A python package and a set of shell commands to handle GTF files

bioinformatics gene rna-seq genomics cds ngs tts transcript bigwig chip-seq gtf bed exon tss dna-sequences genomic intron splicing

Updated Jun 18, 2024
Python

pbenner / gonetics

Go / Golang Bioinformatics Library

golang coverage bam-files bioinformatics bigwig chip-seq golang-library gtf bigwig-files bioinformatics-containers genomic-ranges

Updated Oct 13, 2024
Go

nvictus / pybbi

Python bindings to UCSC BigWig and BigBed library

python bioinformatics genomics numpy cython bigwig bigbed bbi kent

Updated Nov 3, 2025
C

cancerit / cgpBigWig

BigWig manpulation tools using libBigWig and htslib

coverage bioinformatics bigwig htslib bioinformatics-analysis libbigwig

Updated Aug 8, 2024
C

tjparnell / biotoolbox

Tools for querying and analysis of genomic data

bioinformatics rna-seq gff3 annotations vcf fasta bigwig chip-seq bioperl gtf bam

Updated Oct 26, 2025
Perl

brentp / bigwig-nim

command-line querying+conversion of bigwigs and a nim wrapper for dpryan's libbigwig

nim genomics bigwig bigbed high-throughput-sequencing nim-lang

Updated May 2, 2020
Nim

JetBrains-Research / big

BigWIG, BigBED and TDF for the JVM

kotlin jvm bigwig bigbed tdf

Updated Feb 23, 2021
Kotlin

LieberInstitute / megadepth

R interface to megadepth: BigWig and BAM related utilities

rstats bigwig bam recount2 megadepth recount3 daspter

Updated Dec 12, 2024
R

BioJulia / BigWig.jl

bioinformatics bigwig bigwig-files bigwig-reader

Updated Feb 28, 2023
Julia

genotrance / nimbigwig

libBigWig wrapper for Nim

nim bigwig nimble libbigwig c2nim nimgen

Updated Nov 7, 2018
Nim

sirusb / HMMDomainCaller

An HMM-based domain caller from bw

hmm ngs epigenetics bigwig chip-seq cutandrun-seq

Updated Jul 6, 2020
R

ronin-gw / PyMaSC

Python implementation to calc mappability-sensitive cross-correlation for fragment length estimation and quality control for ChIP-Seq.

python bioinformatics quality-control algorithm analysis cython pypi bigwig chip-seq bam cross-correlation mappability

Updated Sep 5, 2025
Python

cnluzon / wigglescout

Explore and visualize genomics bigWig data.

genomics data-visualization bigwig

Updated Oct 4, 2024
R

Genome-Function-Initiative-Oxford / Zone-Equalisation-Normalisation

ZEN-norm is a Python package for normalising bigWigs of genomic signal, reversing prior normalisation and benchmarking normalisation method performance.

genomics epigenetics bigwig chip-seq atac-seq normalization bigwigs normalisation tt-seq

Updated Nov 9, 2025
Jupyter Notebook

pwwang / wigtools

A set of tools for wiggle file

bigwig wiggle-files

Updated May 5, 2020
Python

Improve this page

Add a description, image, and links to the bigwig topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the bigwig topic, visit your repo's landing page and select "manage topics."