💧 Automate message sending with Ngl, delivering one message per second for efficient communication and education purposes.

Complete pipeline that mirrors the manuscript: reference based assembly with depth masking, de novo checks, phylogeny with configurable models including ModelFinder, and targeted mutation analysis for G and F versus NC_038235.1 and NC_001781.1. Includes CI and environment files for easy setup.

Home Assistant integration - Spa Client

Germline variant calling pipeline

A Snakemake pipeline for copy number variant calling without normal tissue samples

The snakyVC pipeline is designed for efficiently and parallelly executing variant calling on next-generation sequencing (NGS) whole-genome datasets.

The DKFZ alignment workflow plugin originally developed at the eilslabs

Small GATK alignment and variant calling pipeline using python

Scalable and High Performance Variant Calling on Cluster Environments

The second part of https://github.com/npanuhin/BIOCAD

Map and post-process your bams for SNP calling

Parse pileup files, generate consensus fasta and calculate heteroplasmy per nucleotide