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All 24 Python 9 GAMS 2 Go 2 Perl 2 C 1 C# 1 C++ 1 R 1 TeX 1 Vim Script 1

bbeckley-hub / ecoliTyper

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EcoliTyper: Unified MLST + Serotyping + Clermont typing for Escherichia coli A comprehensive bioinformatics tool that unifies three essential E. coli genotyping methods into a single, high-performance workflow. Perfect for clinical microbiology, outbreak investigations, and genomic research.

bioinformatics computational-biology public-health epidemiology microbial-genomics mlst ecoli escherichia-coli cge serotyping genotyping outbreak-investigation pathogen-surveillance strain-typing clermont-typing
  • Updated Oct 14, 2025
  • Perl

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