Bayesian Evolutionary Analysis by Sampling Trees

Bayesian Evolutionary Analysis Sampling Trees

Evolving version of Conway’s Game of Life.

Evolution simulator

forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research

Artificial Life Simulation of Bacteria Motion depending on DNA

Simulating complete lives of different cellular animals and plants. Evolution, inheritance, predation and more.

Evolve your own species in this game creates in Java.

Source code for TreeBASE web application and database

Genetic Algorithm for Space Ships to dodge Asteroids

Darwin is a small Java library that helps applications to setup and evolve their database schema over the time. Evolution is based on SQL patch application and aims at traceability, predictability and reliability. It has been for 13 years in production systems.

Fixed topology neural network evolution using evolutionary strategy + genetic algorithm

Generic implementation of genetic algorithm in Java.

Ecotype Simulation: Models the sequence diversity within a bacterial clade.

Generating gate-level electronic circuits on FPGAs through gene expression and morphogenesis closely tied to hardware configuration.

Evolutionary optimization package.

Bash Script to help statistical tests of Multi-Objective Evolutionary Algorithms.

How do proliferation-migration tradeoffs affect phenotypic evolution in a tumors? In this off-lattice agent-based simulation the user can vary trade-off boundaries, death rate, and whether death occurs in response to demographic or environmental stochasticity. See the README file for details.

SAT solver using java. Implementing few strategies like elitism, tournament, dynamic crossover andmore.

Evolution Simulator