[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome

Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you need is a reference genome and some short reads

NIPT-human-genetics is a semi-automated workflow designed for the analysis of large-scale ultra-low-pass non-invasive prenatal test (NIPT) sequencing data in human genetic studies.

This is a template for all assembly projects. Please read the instructions below on how to use it.

Bash Scripts For DNA Analysis

Aphrocallistes vastus genome

bash scripts used in the analysis of Illumina sequence data