Mixed models @lme4 + custom covariances + parameter constraints
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Jan 7, 2021 - R
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ibd
Here are 12 public repositories matching this topic...
HTML widget for displaying IBD segments in an interactive ideogram using Ideogram.js
genomics genetics visualisation ibd htmlwidget interactive-visualization ideogram chromosomes ibd-analysis ibd-segments ibd-mapping
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Sep 26, 2022 - R
Repository of SmoothDescent R package. Smooth Descent is a map-cleaning algorithm that can calculate identity by descent probabilities and correct genotyping errors based on marker maps.
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Feb 11, 2025 - R
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Jul 15, 2023 - R
Statistical reports generated for the PREdiCCt study. These analyses were primarily produced by Nathan Constantine-Cooke, Chiara Cotronei, and Alex Rudge
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Mar 23, 2026 - R
ML analysis to predict C. difficile colonization in fecal communities of IBD & control mice.
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Oct 13, 2022 - R
Beagle to EMI converter
converter clustering ibd beagle emi identity-by-descent-multiple efficient-multiple-ibd beagle2emi beagletoemi bgl2emi bgltoemi
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Nov 30, 2017 - R
R scripts/data for Lucaciu & Constantine-Cooke et al. Real-world experience with tofacitinib in ulcerative colitis - a systematic review and meta-analysis of observational studies.
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Apr 25, 2022 - R
Source code for identification of diagnostic blood biomarkers IBD patients and by applying machine learning on transcriptomics data
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Sep 17, 2025 - R
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