-
Updated
Jun 10, 2026 - Python
#
neoantigens
Here are 9 public repositories matching this topic...
nextNEOpi: a comprehensive pipeline for computational neoantigen prediction
-
Updated
Jun 6, 2025 - Nextflow
Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
bioinformatics immunogenomics immunogenicity-prediction cancer-immunology netmhciipan netmhcpan neoantigen-annotation neoantigens
-
Updated
Jan 27, 2026 - Python
Snakemake-based computational workflow for neoantigen prediction from diverse sources
snakemake gene-fusion indels immunotherapy vaccine peptide snakemake-workflow splicing epitope neoantigens exitron neoepitope
-
Updated
May 26, 2026 - Python
A bayesian hierarchical model for neoantgien-T cell interaction estimation
-
Updated
Jan 20, 2022 - R
Long-read toolkit for mutant proteoform prediction - somatic/germline DNA and RNA variant calling, integration, and translation
-
Updated
May 27, 2026 - Rust
Immunopeptidogenomics — cryptic peptide database construction from RNA-seq. An nf-core-style port of the 31-step IPG pipeline (Scull et al. Mol Cell Proteomics 2021), built for the Li and Purcell Labs at Monash University.
bioinformatics nextflow reproducible-research monash-university rnaseq pixi mhc mass-spectrometry hla cancer-research mutect2 stringtie nf-core cancer-immunotherapy gatk4 neoantigens star-aligner immunopeptidomics immunopeptidogenomics cryptic-peptides
-
Updated
Jun 10, 2026 - Nextflow
ABPEPserver is an online database and analytical platform that offers the visualization of a large-scale tumour proteomics analysis of Substitutant expression across multiple tumour types.
-
Updated
Dec 15, 2022 - R
Improve this page
Add a description, image, and links to the neoantigens topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the neoantigens topic, visit your repo's landing page and select "manage topics."