3D brain registration for LSFM

Scripts and pipeline for the handling of scripts from DICOMS to 4DFP and then analysis.

Software for use at the University of Arizona SCAN Lab

A simple script to deface (with use of fsl_deface) multiple T1/T2-weighetned files prepared according to the BIDS standard.

A Whole-Brain 3D Myeloarchitectonic Atlas: Mapping the Vogt-Vogt Legacy to the Cortical Surface

Alcohol study DTI Analyses

An innovative and collaborative solution for setting up and executing Jupyter Notebooks on High-Performance Computing (HPC) clusters, tailored for neuroscience data processing workflows.

🧠 Capture context seamlessly across devices and projects, enabling AI to maintain continuity in your digital brain system.

Docker container for FiberNavigator for Brainlife.io

Batch download the BigBrain slices and more

Pipeline for Cortical and Subcortical SC and FC

Common Docker Image for the Dosenbach and Greene Labs

Scripts related to "Associations between attention-deficit hyperactivity disorder (ADHD) symptom remission and white matter microstructure: A longitudinal analysis"

Pipeline computing volumes statistics for different brain lobes according to a atlas.

Shell scripts pipelines to create DTI templates

Scripts related to "White Matter Microstructure in Attention-Deficit/Hyperactivity Disorder: A Systematic Tractography Study in 654 Individuals"

The idea behind this website is to make available all the resources I have gathered/created over the years make other people's life easier.

Scripts related to "Longitudinal changes of ADHD symptoms in association with white matter microstructure: A tract-specific fixel-based analysis"

A sample neuroimaging pipeline for the fMRI data collected by the Aging Brain Cohort.

Gentoo Science Overlay