Skip to content
#

ora

Star

Here are 56 public repositories matching this topic...

Language: All
Filter by language
All 56 JavaScript 22 TypeScript 9 Python 7 C# 3 HTML 3 Java 2 TeX 2 C++ 1 Jupyter Notebook 1 PHP 1
Sort: Most forks
Sort options
Most stars Fewest stars Most forks Fewest forks Recently updated Least recently updated

francescopatane96 / RNA-seq_Pipeline

Star 2

Deposited R scripts allow to execute a complete RNA-seq Pipeline, starting from sequence reads (FASTQ files) to mapping/annotate the genome using a reference, to counts the number of reads for every gene. when raw counts are obtained, DESeq2 module permits to find differentially expressed genes (DEG) and to perform statistical analysis. The last…

bam-files rna-seq r script deseq2 rna-seq-analysis kegg wikipathways reactome ora geneontology gsea rna-seq-pipeline reactome-pathway differentially-expressed-genes clusterprofiler deseq2-analysis gene-set-enrichment-analysis diseaseontology over-rapresentation-analysis
  • Updated Apr 14, 2023
  • Jupyter Notebook

Improve this page

Add a description, image, and links to the ora topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the ora topic, visit your repo's landing page and select "manage topics."

Learn more