gwasrapidd: an R package to query, download and wrangle GWAS Catalog data

An interactive graphical illustration of genetic associations and their biological context

An R/Shiny platform for genome-wide SNP analysis and visualization with AI-assisted features

Suit of R-scripts to perform landscape genomic analyses

A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines

R package for RIVER (RNA-Informed Variant Effect on Regulation)

Fast manhattenplots using ggplot2

Functions to analyse UK Biobank genetic data directly from DNA Nexus' RStudio Workbench

Phasing, haplotype reconstruction and crossover detection with single-nucleotide polymorphism data from multiparental populations.

The R package is for single-cell eQTL analysis and visualization.

A QC pipeline for SVs calls based on coverage and SNP calls

Tool for genome wide association studies with Bayesian inference and statistical learning

SNV and indel genotyping by Nanopore Amplicon Sequencing and subsequenct variant calling

An Interactive Shiny-Based Platform for Genome-Wide SNP Analysis and Visualization

plinker is a R package to interface PLINK over PLINK BED files.

Analysis of SNPs that have the greatest impact of appearance of mammary gland tumour in dogs.

Scripts and command line from study on spring-obligate pleurocerid snails in Alabama.

This R script retrieves upstream and downstream DNA flanking sequences for given rsIDs or a list of rsIDs. It utilizes online databases to download sequence data and miscellaneous data about the SNP.

Rapid pedigree construction from SNP genotypes

Implement R-prime measure of linkage disequilibrium