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🍺🔬 Bioinformatics formulae for the Homebrew package manager (macOS and Linux)

Ruby 321 118 Updated Mar 2, 2026

 This project is dedicated to collecting high-quality macOS software and organizing them systematically by different categories for easy search and use.

JavaScript 100,813 7,528 Updated Mar 23, 2026

This repository is for active development of the Azure SDK for JavaScript (NodeJS & Browser). For consumers of the SDK we recommend visiting our public developer docs at https://docs.microsoft.com/…

TypeScript 2,280 1,356 Updated Mar 24, 2026

Posit Cheat Sheets - Can also be found at https://posit.co/resources/cheatsheets/.

TeX 6,320 1,938 Updated Mar 2, 2026

Biopython Jupyter Notebook tutorial to characterize a small genome

Jupyter Notebook 100 21 Updated Apr 8, 2020

Nextstrain build for SARS-CoV-2

Python 1,360 409 Updated Mar 2, 2026

Demonstrating best practices for bioinformatics command line tools

Shell 115 25 Updated Sep 25, 2020

Processing pipeline for pan-genome visulization and exploration

Python 144 39 Updated Oct 9, 2023

RAxML Next Generation: faster, easier-to-use and more flexible

C 460 68 Updated Mar 24, 2026

Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction

Jupyter Notebook 250 58 Updated Mar 24, 2026

Automatically exported from code.google.com/p/figtree

Java 461 118 Updated Mar 20, 2026

Web app for visualizing pathogen evolution

JavaScript 307 169 Updated Mar 17, 2026

Tutorials on phylogenetic and phylogenomic inference

HTML 396 177 Updated Sep 13, 2023

A Python library for phylogenetic scripting, simulation, data processing and manipulation.

Python 233 59 Updated Jan 8, 2026

Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files

Python 129 23 Updated Dec 6, 2021

PhyML -- Phylogenetic estimation using (Maximum) Likelihood

C 195 63 Updated Mar 19, 2026

Interactive viewer of phylogenetic trees

JavaScript 197 78 Updated Mar 21, 2026

Pandas DataFrames for phylogenetics

Python 75 22 Updated Jun 6, 2021

Comprehensive Python Cheatsheet

Python 38,303 6,733 Updated Mar 19, 2026

A simple graphical guide to working as a team on Github

34 11 Updated Aug 30, 2018

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …

Python 871 227 Updated Mar 17, 2026

🎄Visualization and annotation of phylogenetic trees

R 922 184 Updated Mar 23, 2026

Alignment editor for Mac OS X

Objective-C 29 4 Updated Aug 1, 2017