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Research code accompanying AlphaGenome

Python 780 131 Updated Jun 15, 2026

This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.

Python 1,948 260 Updated May 6, 2026

Compositional Linear Algebra

Python 516 35 Updated Aug 1, 2025

A playbook for systematically maximizing the performance of deep learning models.

30,194 2,421 Updated Jun 18, 2024

Repository of Jupyter notebook tutorials for teaching the Deep Learning Course at the University of Amsterdam (MSc AI), Fall 2023

Jupyter Notebook 3,161 682 Updated Jun 1, 2026

Official PyTorch Implementation of "SiT: Exploring Flow and Diffusion-based Generative Models with Scalable Interpolant Transformers"

Python 1,171 80 Updated Dec 22, 2025

Here you can find (just about) all of the diagrams I've ever made in LaTeX using TikZ (and Pgfplots).

TeX 16 Updated Jan 21, 2020

A minimal & modern LaTeX template for your (bachelor's | master's | doctoral) thesis

TeX 1,228 137 Updated May 18, 2026

Some simple Blender scripts for rendering paper figures

Python 835 78 Updated Dec 16, 2025

PyTorch Lightning + Hydra. A very user-friendly template for ML experimentation. ⚡🔥⚡

Python 5,300 759 Updated Jun 11, 2026

Simple code for generating a color-coded latex table from raw data

Jupyter Notebook 211 6 Updated May 19, 2025

Quill - A Modern SaaS-Platform Built With Next.js 13

TypeScript 2,001 515 Updated May 14, 2024

v objective diffusion inference code for JAX.

Python 217 17 Updated Apr 14, 2022

nivo provides a rich set of dataviz components, built on top of the awesome d3 and React libraries

TypeScript 14,041 1,077 Updated Apr 3, 2026

Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)

Python 274 22 Updated Apr 27, 2025

Python logging made (stupidly) simple

Python 23,968 797 Updated Jun 13, 2026

JAX implementation of the Llama 2 model

Python 217 24 Updated Feb 2, 2024

Numerical differential equation solvers in JAX. Autodifferentiable and GPU-capable. https://docs.kidger.site/diffrax/

Python 2,052 184 Updated Jun 2, 2026

Declarative, type-safe command line argument parsers from dataclasses and attrs classes

Python 70 7 Updated Jan 29, 2026

Implementation for SE(3) diffusion model with application to protein backbone generation

Python 423 67 Updated Jul 3, 2023

ESM2 protein language models in JAX/Flax

Python 19 5 Updated Oct 10, 2022

Legible, Scalable, Reproducible Foundation Models with Named Tensors and Jax

Python 708 121 Updated Jan 26, 2026

CeTZ: ein Typst Zeichenpaket - A library for drawing stuff with Typst.

Typst 1,771 78 Updated May 29, 2026

NUBO is a Bayesian optimisation framework for the optimisation of expensive-to-evaluate black-box functions developed by the Fluid Dynamics Lab at Newcastle University.

Python 15 1 Updated Sep 11, 2025

React components to build charts and dashboards

TypeScript 16,467 475 Updated Jan 13, 2025

Joint sequence and structure generation with RoseTTAFold sequence space diffusion

Python 332 59 Updated Oct 28, 2024

Lightweight Python framework that provides a high-level API for creating and rendering scenes with Blender.

Python 863 20 Updated Sep 13, 2025

An open source application built using the new router, server components and everything new in Next.js 13.

TypeScript 19,248 2,732 Updated Apr 20, 2026

A simple, performant and scalable Jax LLM!

Python 2,329 539 Updated Jun 18, 2026

Represent, send, store and search multimodal data

Python 3,121 244 Updated Mar 27, 2026
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