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Python 11 11 Updated Jun 29, 2023

Advanced Python Mastery (course by @dabeaz)

Python 13,171 2,244 Updated Dec 22, 2025

A markup-based typesetting system that is powerful and easy to learn.

Rust 52,623 1,537 Updated Apr 10, 2026
Jupyter Notebook 11 Updated Jul 9, 2023

Transparent and robust SARS-CoV-2 variant calling and lineage assignment with comprehensive reporting.

Python 22 8 Updated Feb 9, 2026

Somatic structural variant caller for long-read data

Python 91 9 Updated Mar 3, 2026

Webserver for Planemo Training Development Kit

Python 4 2 Updated May 8, 2024

Clock using time quotes from the literature, based on the work of Jaap Meijers

R 703 134 Updated Mar 28, 2025

Tiling PCR primer scheme definitions

11 5 Updated Mar 12, 2026

A tool to create visual HTML reports from collections of CSV/TSV tables

Rust 673 40 Updated Apr 7, 2026

Carbon Language's main repository: documents, design, implementation, and related tools. (NOTE: Carbon Language is experimental; see README)

C++ 33,662 1,532 Updated Apr 11, 2026

A collection of modern/faster/saner alternatives to common unix commands.

32,865 827 Updated Sep 10, 2024

For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.

Ruby 91 59 Updated Apr 8, 2026

Galaxy Workflows maintained by the Intergalactic Workflow Commission

Vue 53 89 Updated Apr 10, 2026

Matrix Corporal: reconciliator and gateway for a managed Matrix server

Go 160 15 Updated Nov 20, 2025

A curated list of awesome public Galaxy histories

1 Updated Jun 19, 2021

A collection of Galaxy-related training material

HTML 359 1,057 Updated Apr 11, 2026

ENA upload cli - script your Open Data upload to the European Nucleotide Archive

Python 29 19 Updated Mar 30, 2026
Python 9 2 Updated Apr 14, 2021

Tool Shed repositories maintained by the Intergalactic Utilities Commission

HTML 199 506 Updated Apr 10, 2026

Data intensive science for everyone.

Python 1,752 1,143 Updated Apr 10, 2026

HyPhy: Hypothesis testing using Phylogenies

HyPhy 254 70 Updated Mar 23, 2026

Collection of scripts for automated SARS-CoV-2 genome surveillance.

Python 24 8 Updated Sep 19, 2023

Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.

Python 20 8 Updated Dec 13, 2021

Python library for RO-Crate

Python 81 35 Updated Mar 25, 2026

Lifterover copy number segments in whole

Python 24 4 Updated Feb 6, 2024

Simple, lightweight, and magic-free static site/blog generator for Python coders

Python 1,871 306 Updated Mar 4, 2023

This not my project, just an old fork. Upstream is here

Rust 8 Updated May 4, 2019

Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures

Jupyter Notebook 127 76 Updated Feb 3, 2023
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