Intervene: a tool for intersection and visualization of multiple genomic region and gene sets

Panel: The powerful data exploration & web app framework for Python

Tools to process and analyze deep sequencing data.

New computational framework to process and analyze KAS-seq and spKAS-seq data.

racoon_clip processes your iCLIP and eCLIP data from raw files to single-nucleotide crosslinks in a single step.

Make Interactive Complex Heatmaps

An interactive Shiny App for UpSet plots, Venn diagrams and Pairwise heatmaps

🍰 Everything is RSSible

Devel repository for bsseq

Open Source Metering and Usage Based Billing

Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also…

It's a tool to translate subtitles into any language, that is supported by google translator :)

10x Genomics Single Cell 3' Gene Expression and VDJ Assembly

pikpak web https://xubeisi.github.io/pikpak

Beisi Xu

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Lightweight html5 version of the Integrative Genomics Viewer

AriaNg, support aria2c command-line-like

Check strandedness of RNA-Seq fastq files

ProTiler method for the analysis and visualization of CRISPR screens with tiling-sgRNA design

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

This package contains deep learning models and related scripts for RoseTTAFold

Easy to AF2

A toolkit for analyzing architectural stripes

Example code for calling Panther API services

Example Streamlit app that you can fork to test out share.streamlit.io