Generate images of code and terminal output 📸

Official implementation of MuViT (CVPR 2026), a ViT-based architecture for multi-scale modelling of gigapixel microscopy images.

Modern Bio-Formats wrapper with clean lazy Python API

computer vision models for single-cell phenotyping

Rust library for displaying images in the terminal.

Tracksdata compatible ultrack package

A Hierarchical Softmax Framework for PyTorch

Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata

Ngio is a Python library to streamline OME-Zarr image analysis workflows.

Loading and handling microscopy data in blender

Contexts Optical Compression

PDF reader for terminal emulators using the Kitty image protocol

Transformer-based cell tracking for live-cell microscopy

Pydantic models for the TensorStore Spec

TorchDR - PyTorch Dimensionality Reduction

🥢像老乡鸡🐔那样做饭。主要部分于2024年完工，非老乡鸡官方仓库。文字来自《老乡鸡菜品溯源报告》，并做归纳、编辑与整理。CookLikeHOC.

Helpful tools and examples for working with flex-attention

Implementation of 1D, 2D, and 3D FFT convolutions in PyTorch. Much faster than direct convolutions for large kernel sizes.

Manage multiple versions of your MkDocs-powered documentation via Git

Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.

Reference implementation of the Graph Exchange File Format

Reference PyTorch implementation and models for DINOv3

Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

Code release for DynamicTanh (DyT)

Differentiable wave optics using JAX! Documentation can be found at https://chromatix.readthedocs.io

🦉 Data Versioning and ML Experiments

Generates synthetic datasets for Cryo-Electron Tomography

Sampling profiler for Python programs

Differentiable signal processing on the sphere for PyTorch

Scalable array processing with bounded memory