Lists (2)
Starred repositories
Jupyter widget to interactively view molecular structures and trajectories
Collection of open source software projects in which members of the Faculty of Computer Science at TU Dresden are involved.
dN/dS methods to quantify selection in cancer and somatic evolution
A computational approach for identifying cancer driver genes by detecting three-dimensional clusters of somatic missense mutations in protein structures.
Learning pipeline to identify somatic SNVs under positive selection.
A deep-learning framework for multi-omics integration
Parsing tools for GTF (gene transfer format) files
a framework for automatic and comprehensive knowledge extraction based on mutational data from sequenced tumor samples from patients.
A generative world for general-purpose robotics & embodied AI learning.
CADD scripts release for offline scoring. For more information about CADD, please visit our website
Edge representation learning library
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
Pytorch Geometric Tutorials
A minimalist Python package for reading and writing MAF files.
Python package for processing and creating MAF files for the GDC
Type annotations and runtime checking for shape and dtype of JAX/NumPy/PyTorch/etc. arrays. https://docs.kidger.site/jaxtyping/
CGMega: dissecting cancer gene module with explainable graph attention network
A positive-unlabeled ensemble learning framework for disease gene prioritization.
A curated list of papers on graph structure learning (GSL).