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Package for managing conda environment-based kernels inside of Jupyter
Header-only C++/python library for fast approximate nearest neighbors
Interactive Widgets for the Jupyter Notebook
A library for efficient similarity search and clustering of dense vectors.
Accelerated, Python-only, single-cell integration benchmarking metrics
Open-source, self-hosted note-taking tool built for quick capture. Markdown-native, lightweight, and fully yours.
Get up and running with Kimi-K2.6, GLM-5.1, MiniMax, DeepSeek, gpt-oss, Qwen, Gemma and other models.
Ray is an AI compute engine. Ray consists of a core distributed runtime and a set of AI Libraries for accelerating ML workloads.
rapids-singlecell: GPU-accelerated framework for scRNA analysis
An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.
🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments.
A tool for creating and running Linux containers using lightweight virtual machines on a Mac. It is written in Swift, and optimized for Apple silicon.
RFMIX - Local Ancestry and Admixture Inference Version 2
Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis
Powerful system-level package manager for Linux, macOS and Windows written in Rust – building on top of the Conda ecosystem.
Google Drive public file downloader when curl/wget fails.
Intuitive guide to multi-omics integration with toy examples: supervised latent components (DIABLO), unsupervised shared/partial/unique structure (DIVAS), VAEs/conditional VAEs, and key baselines (…
Convert PDF to markdown + JSON quickly with high accuracy
PhiSpace for continuous phenotyping single-cell and spatial transcriptomics data
R package for quality control of plink genetic datasets
A bioinformatics pipeline to phase and impute genetic data
Download market data from Yahoo! Finance's API
Viral catalogue generation pipeline
A comprehensive cancer DNA/RNA analysis and reporting pipeline