Commits

Commits on Aug 7, 2026

Merge pull request #181 from PoonLab/test-superinf
ArtPoon
authored
298a118
Fixed bug where it would say Host X is already in this HostSet'in .do.infection's superinfection branch, when no pathogens transfer (n.transfer == 0), the code unconditionally called inactive.host(…
WongDWai
committed
99c980b
added hand-built tree test for resolve.arg
WongDWai
committed
76c6ab4
filter.firsts removed rows given the attribute 'removed' rather than discarding them so all lines are drawn in the tree when plotting.
WongDWai
committed
c16f6d6

Commits on Jul 31, 2026

Commits on Jul 24, 2026

Commits on Jul 17, 2026

Commits on Jul 16, 2026

Fix input in set.parent for list and single input
WongDWai
committed
c30dc22

Commits on Jul 15, 2026

Remove unused set.log method from InnerTree
WongDWai
committed
73cac96

Commits on Jul 8, 2026

add breakpoint on pathogen test.
WongDWai
committed
1566637

Commits on Jul 7, 2026

Remove duplicate resolve.arg definition
WongDWai
committed
262c4ec
update unit tests
WongDWai
committed
65bfa6f

Commits on Jul 6, 2026

Store recombination breakpoint position
WongDWai
committed
027d895

Commits on Jul 3, 2026

Commits on Jun 16, 2026

Merge pull request #174 from PoonLab/dev
ArtPoon
authored
e2189c8
closes #170
ArtPoon
committed
c213d4b
wrote unit tests to troubleshoot #173, worked on #170
ArtPoon
committed
0ab0ca6

Commits on Jun 1, 2026

potential fix for #172
ArtPoon
committed
ae79d20
allow user to reposiiton legend for plot.OuterTree
ArtPoon
committed
c84d5f1

Commits on May 26, 2026

Merge branch 'dev' of https://github.com/PoonLab/twt
ArtPoon
committed
226eec9

Commits on May 12, 2026

make time available, #170
ArtPoon
committed
0df13a4