Pre-training OLMO-7B model on cheminformatics dataset

A collection of agent skills for BioPharma use cases GSDBench Intake https://rconsortium.github.io/pharma-skills/gsdbench-intake/

A Claude Skill to create an evidence review to inform specific health questions

Minimalist Hugo theme built on Tailwind CSS

Find issues worth your attention.

A game-based system for scientific hypothesis refinement

Agent skills for Manim to create 3Blue1Brown style animations.

N-Dimensional Rotary Positional Encodings (RoPE) in PyTorch

Belief in the Machine: Investigating Epistemological Blind Spots of Language Models

Discovering Interpretable Features in Protein Language Models via Sparse Autoencoders

A simple script to extract bioactivity data from the ChEBML database

Repo housing the open sourced code for the ai2 scholar qa app and also the corresponding library

Repository with sample code using Apollo's suggested engineering practices

Scripts to support publication: Deep Molecular Pathology Profiling of Synovial Tissue Biopsies in the R4RA Randomised Clinical Trial Identifies Predictive Signatures of Response/Resistance to Biolo…

Research code exploring shared subspaces in attention and feedforward networks. Includes SVD analysis of pre-trained models, experiments with shared output projections, and latent-space-efficient T…

Source code and files for Real World Data Science website.

Streamlit web app for the Inspect Evals dashboard

A Model Context Protocol server for Linear.

Fusion strategies to build multimodal predictors for the prediction of immunotherapy response in non-small cell lung cancer

Deep survival analysis made easy

MidOne Attackers

PyLops – A Linear-Operator Library for Python

Fully local web research and report writing assistant

MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)

YLearn, a pun of "learn why", is a python package for causal inference