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Python tool for converting files and office documents to Markdown.

Python 156,636 10,905 Updated May 26, 2026

Sutskever 30 implementations inspired by https://papercode.vercel.app/ | For Agents, use https://github.com/pageman/Sutskever-Agent | Polyglot / Multi-Backed version at https://github.com/pageman/s…

Jupyter Notebook 3,277 445 Updated Mar 15, 2026

Molecular dynamics simulation skills for AI agents

Python 6 1 Updated Jun 21, 2026

A key remapping daemon for linux.

C 5,580 254 Updated Jun 1, 2026

Visualizing Cell Structures with Minecraft

Jupyter Notebook 60 3 Updated Feb 8, 2025

Spacemacs like keybindings for Visual Studio Code

TypeScript 1,532 129 Updated Feb 7, 2026

Enchanted is iOS and macOS app for chatting with private self hosted language models such as Llama2, Mistral or Vicuna using Ollama.

Swift 5,966 422 Updated Jun 15, 2026

List of molecules (small molecules, RNA, peptide, protein, enzymes, antibody, and PPIs) conformations and molecular dynamics (force fields) using generative artificial intelligence and deep learning

298 27 Updated Jun 20, 2026

AlphaFold 3 inference pipeline.

Python 8,240 1,272 Updated Jun 9, 2026

Solve puzzles. Learn CUDA.

Jupyter Notebook 12,241 932 Updated Sep 1, 2024

A one stop repository for generative AI research updates, interview resources, notebooks and much more!

HTML 27,802 5,756 Updated Jun 20, 2026
Python 8 1 Updated Jan 12, 2022

《Pytorch实用教程》(第二版)无论是零基础入门,还是CV、NLP、LLM项目应用,或是进阶工程化部署落地,在这里都有。相信在本书的帮助下,读者将能够轻松掌握 PyTorch 的使用,成为一名优秀的深度学习工程师。

Jupyter Notebook 4,551 483 Updated Jan 27, 2025

BioEn - Bayesian Inference Of ENsembles

Python 24 10 Updated Feb 6, 2024

Geometric super-resolution for molecular geometries

Python 42 7 Updated Jun 15, 2022

A list of all named GANs!

Python 14,699 2,537 Updated Oct 6, 2023

Standardized data set for machine learning of protein structure

Python 916 138 Updated Nov 18, 2020

An all-atom protein structure dataset for machine learning.

Python 364 38 Updated Mar 16, 2024

A repository of update in molecular dynamics field by recent progress in machine learning and deep learning.

342 62 Updated Jan 25, 2026

《Hello 算法》:动画图解、一键运行的数据结构与算法教程。支持简中、繁中、English、日本語,提供 Python, Java, C++, C, C#, JS, Go, Swift, Rust, Ruby, Kotlin, TS, Dart 等代码实现

Java 127,784 15,208 Updated Apr 18, 2026

Integrative Generalized Master Equation (IGME): A Theory to Study Long-timescale Biomolecular Dynamics via the Integrals of Memory Kernels

Jupyter Notebook 8 2 Updated Jun 12, 2026

A quick capture plugin for Obsidian, all data from your notes.

1,341 86 Updated Jun 15, 2026

MySnippets is a plugin that adds a status bar menu allowing the user to quickly manage their snippets within the comfort of their workspace 🖌.

TypeScript 196 6 Updated Apr 24, 2024

Animation engine for explanatory math videos

Python 87,767 7,328 Updated Apr 18, 2026

WESTPA: The Weighted Ensemble Simulation Toolkit with Parallelization and Analysis

Python 216 63 Updated Jun 12, 2026

Open source code for AlphaFold 2.

Python 14,682 2,629 Updated Apr 22, 2026

Application to assign secondary structure to proteins

C++ 263 32 Updated Jun 16, 2026

Anatole is a minimalistic two-column theme for Hugo.

HTML 738 383 Updated Mar 4, 2026

Emacs Math Symbol Input and LaTeX conversion tools.

Emacs Lisp 15 5 Updated Oct 5, 2020

Hands-on tutorials for Markov state modeling of MD and EXP data

Jupyter Notebook 3 2 Updated Mar 9, 2021
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