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Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.

Python 49 13 Updated Apr 17, 2023

python pipeline for FSL fmri data analysis that can be used on high performance computing clusters with slurm schedulers

Python 9 1 Updated May 30, 2025

group sequential tests for neuroimaging

Jupyter Notebook 9 1 Updated Jul 20, 2023

HBN data processing code

Python 6 4 Updated Oct 9, 2024

A python package for predicting group-level fMRI responses to visual stimuli using deep neural networks

Jupyter Notebook 13 1 Updated Mar 31, 2025

A list of openly available resources for learning and using the Python programming language.

59 9 Updated May 9, 2024

I am trying to describe complex matters in simple doodles!

11,399 799 Updated Jan 23, 2024

Example code for PSC210 Fundamentals of Cognitive Neuroimaging

Jupyter Notebook 1 Updated Oct 20, 2021
Jupyter Notebook 3 Updated Aug 18, 2022

ROC Toolbox for Matlab

MATLAB 16 10 Updated Jul 24, 2022

Do papers using cleanBib have more gender-balanced reference lists? Assessing the impact of the cleanBib tool

Jupyter Notebook 6 3 Updated Jun 19, 2021

Probabilistically assign gender and race proportions of first/last authors pairs in bibliography entries

TeX 159 34 Updated Sep 13, 2024

This python script guesses the race and gender (probabilistically) of the first and last authors for papers in your citation list (in the form of a .bib file) and compares your list to expected dis…

TeX 24 4 Updated Dec 15, 2021

Simulate an experiment with optimal stimuli segmentation

Shell 1 Updated Dec 7, 2019

Course materials for PSYC 132: Introduction to Programming for Psychological Scientists

Jupyter Notebook 94 12 Updated Sep 30, 2025

Nuisance removal tool for fMRI data

Python 58 18 Updated Mar 9, 2024

Lecture notes for EC 607

HTML 1,667 655 Updated Apr 3, 2023

Computational Cognitive Neuroscience textbook

TeX 379 34 Updated Feb 22, 2026

Notebooks to introduce R users to Python

Jupyter Notebook 20 5 Updated Mar 3, 2020

Tutorials that cover topics from basics to advanced fMRI analysis

HTML 49 37 Updated Jul 10, 2020

Brain Imaging Analysis Kit

Python 373 142 Updated Jun 20, 2026

brain connectivity toolbox for python

Python 343 151 Updated Nov 25, 2025

Computational Neuroscience in Python

Python 4 Updated Nov 23, 2017

NLP tutorial for the psych methods group at Columbia

Jupyter Notebook 7 Updated Oct 31, 2019
Jupyter Notebook 809 186 Updated Dec 29, 2020

Tutorial on resting-state fMRI functional connectivity for the 2017 Dartmouth MIND summer school.

MATLAB 8 10 Updated Aug 16, 2017

List of summer schools in neuroscience and related fields

Python 229 36 Updated May 10, 2019

An algorithm for unsupervised discovery of sequential structure

MATLAB 176 58 Updated Mar 17, 2024
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