image: "artiwon.bom.gov.au/containers/build-python-conda:4.1"

stages:

- test

variables:

PIP_CACHE_DIR: "$CI_PROJECT_DIR/.cache/pip"

cache:

paths:

- .cache/pip

before_script:

- python --version

- conda env list # List available pre-built environments

- source activate py311

- conda list # Check what's already installed in the current conda environment

# Install dependencies via conda-forge instead of pip

- conda install -c conda-forge numpy scipy pandas h5py netcdf4 xarray pyproj pytest pytest-cov -y

# Install pyodim via pip only if not available in conda-forge

- pip install pyodim

- pip install -e . --no-build-isolation --no-deps # Install package without dependencies

test:

stage: test

script:

- pytest --verbose --cov=gpmmatch --cov-report=term --cov-report=xml

coverage: '/(?i)total.*? (100(?:\.0+)?\%|[1-9]?\d(?:\.\d+)?\%)$/'

artifacts:

reports:

coverage_report:

coverage_format: cobertura

path: coverage.xml

expire_in: 7 days

rules:

- if: '$CI_PIPELINE_SOURCE == "push"'

when: on_success

- if: '$CI_PIPELINE_SOURCE == "merge_request_event"'

when: on_success

- when: manual

allow_failure: true