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mimitair/README.md

Who Am I?

Hello there. Allow me to introduce myself. My name is Miguel, aka mimitair (the coolest gamer-tag my 12-yo self could come up with). I'm currently working as a PhD student in the Soil- and Water Management lab at the KULeuven, Belgium (https://ees.kuleuven.be/en/bwb). In our lab, we harness the power of micro-organisms to process and valorize a wide variety of waste streams (agricultural waste, wastewater, plastics...). In this context, I'm now studying the enzymatic degradation of natural and synthetic polymers, combining both dry- and wet-lab work.

Academic output

  • Bachelor's thesis

    Antimicrobial activity of Camellia oleifera leaves infected with the fungus Exobasidium gracile (see academic_output folder)

  • Master's Thesis

    In silico discovery of copper oxidases for the degradation of polyethylene (see academic_output folder)

  • Publication

    CAGEcleaner: reducing genomic redundancy in gene cluster mining. (Full text can be found here).

Software

  • CAGEcleaner Static Badge Static Badge

    Tool to filter redundancy in gene cluster mining hits by dereplication of host genomes and/or genomic region. Can be seen as a complementary tool for cblaster. Repository can be found here.

  • biolib Static Badge

    General-purpose library for common bioinformatics tasks. Repository can be found here.

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    This repository keeps track of all the rosalind (bioinformatics learning platform) exercises I solve.

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    Python library to consult for common or not-so-common bioinformatics tasks.

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