Message Passing Neural Networks for Molecule Property Prediction

mlops template

rnalib: a python-based transcriptomics library

Practical Cheminformatics Tutorials

Machine Learning in Drug Discovery Resources 2024

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

Imaging, analysis, and simulation software for radio interferometry

qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.

An extensible open-source framework for creating private/permissioned blockchain applications

Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files

In-progress projects at Harvard School of Public Health Bioinformatics Core

Diablo devolved - magic behind the 1996 computer game

A convenient interface to dockerised command line tools

Data and analysis for NA12878 genome on nanopore

SV caller for nanopore data

Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Tool for visualizing GitHub profiles

A comparison of different Oxford Nanopore basecallers

Less rage, more chill.

Additional materials related to Bitcoin and Cryptocurrency Technologies course on Coursera, maintained by the mentors of that course.

A plugin for Kerbal Space Program which adds some SSTV, beeps, and nonsensical radio chatter between your crewed command pods and Mission Control.

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

Kerbal Engineer v1.0 (current in-development build).

Aggregate results from bioinformatics analyses across many samples into a single report.

Miscellaneous utility and development scripts

Scripts for implementing read until and other examples.

Original Apollo 11 Guidance Computer (AGC) source code for the command and lunar modules.