Lists (1)
Stars
Package for fetching metadata and downloading data from SRA/ENA/GEO
Mypy stubs, i.e., type information, for numpy, pandas and matplotlib
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
MyGene.info: A BioThings API for gene annotations
Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.
Fast-ish (and correct!) quantile normalization in Python.
Attraction-Repulsion Spectrum in Neighbor Embeddings